CDS

Accession Number TCMCG018C11069
gbkey CDS
Protein Id XP_004149586.1
Location complement(join(3856410..3856490,3856584..3856699,3856916..3856939,3857116..3857147,3857612..3857697,3857780..3857833,3859734..3859795,3859916..3859977,3860213..3860299,3860389..3860465,3861219..3861277,3861374..3861438,3861526..3861615,3861749..3861845,3862095..3862194,3862268..3862341,3862707..3862788,3862878..3862928,3863200..3863277,3863522..3863566,3863652..3863753,3864243..3864299,3864435..3864521,3864653..3864710,3864804..3864835,3864907..3864934,3865000..3865101,3865200..3865354,3865910..3865973,3866158..3866230,3866304..3866384,3866616..3866710,3867154..3867185,3868137..3868172))
Gene LOC101222668
GeneID 101222668
Organism Cucumis sativus

Protein

Length 807aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_004149538.3
Definition DNA mismatch repair protein MSH5 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAGTGGATGAAACGGAAGCGGTGCCTCAGATATACATGGCTTGTGTCAAACATGGACAAAAAGTGGGAGTTTCATACTATGATTCTAGCATCCGCCAGCTTCATGTGCTGGAAGTTTGGGAAGATGGCAGCATTGAATATCCTCTCATTGATTTAGTGAAATATCAAGCTAAGCCCCTAATGATCTATACTAGCACTAAAAGTGAGGAGTCTTTCTTGGCTGCTTTGCAACGGAGCGACGGGATGTCTGAGGCTCCTACAGTGAAGCTTGTGAAGAGTTCAATTTTCAGCTATGAACAGGCCTGGCACAGATTGGTATACCTACGAGTAACAGGAATGGATGATGGATTAAACATCAAGGAGAGGATTTGTTACTTGAGTTCTATGATGGACGTGGAAAGTGAAGTTCAAGTTCGTGCTAGTGGGGGTCTTCTTGCCATACTGGAAAGTGAAAGAATCGTGGACACGCTTGAACAAAAAGAACTTGGAACTTCATCAATAACGATTGATTCTGTCATAGAAATTTCGCTAAACAACTTTCTAAAACTCGATGCAACAGCTTTGGAAGCATTGCAAATATTTCAAACTGACAAACATCCCAGCCATATGGGCATTGGAAGAGCAAAAGAAGGGTTCTCTGTATTTGGCATGATGAATAAGTGTGTGACACCTATGGGTAGACGCCTCTTGAGAAACTGGTTCCTGAGGCCATTACTGGATCTTGAAAATTTGAATAAGCGGCTTAATGCTATATCATTCTTTATTTCTTCCGATGAATTGATGCATTCCTTACGGGAAACTCTAAAGATTGTCAAGGACATTCCCCATATACTCAAGAAATTCAATTCCCCAAGCTCAACGTATTCTTCTGGTGATTGGACTGCATTCTTGAAGAGTATTTGCTCTCTTTTGCACGTGAATAAGATATTTGAAGTTGGCATGTCAGAGAATCTTAAAGAAAACATGAAGTACTTTAATTTGGACATTGTTGAGAAGGCGAATACATGCATTACAACAGAATTGGCTTATGTTTATGAACTGGTTATTGGTGTCTTGGATGTTAGTAGAAGCAAAGAGAAGTCGTATGAGACAATTGTGAAGGAGGGTTTTTGTGAAGAGTTGGATGAGCTGAGGGAAGTCTACGAGGAACTGCCTGAATTTTTGGAGGAGGTTTCTTCAATGGAACTTGCTCAATTCCCTCAGTTGTGTAAATACACGATTGCCCCCTGTATAGTCTACATTCATCAAATAGGTTATTTATTATGCATATTTGAAGAGAAACTTGACGAAAGCACATTAGAGATCCTACAAGACTTTGAATTTGCTTTCTCTGATGTGGATGGAGATATAAAAAGATTCTTTTACCATAGTCCAAAAACACGAGAATTGGATAATCTGCTTGGAGACATTTATCACAAAATTTTAGATATGGAGAGGGCAATTATTAGAGACTTGGTGTCGCATATACTTGTTTTCTCTCTGCATCTGCATAAGGCTGTAGATTTTGCGGCTGAACTTGATTGCTTTTTATCTCTAGCACTGATTGCTCGTCAGAACAACTATGTAAGGCCAGATTTAACTGCAGATAGCATGCTTGATATTAAGAATGGAAGGCATGTTTTGCAGGAAATGGCAGTAGATACATTTATTCCAAATGACACGAAGATTTTTTATGATGGAAGAGTTAATATCATTACTGGCCCAAATTATTCTGGTAAAAGTATCTATGTAAAACAGGTTGCTCTTATTGTATTCTTGTCTCATATAGGAAGCTTTGTTCCAGCAGAAGCTGCGACTGTAGGTTTGACTGATAGAATATTTTGTGCTATGGGGAGCAAGCATATGACTGCAGAACAATCAACTTTTATGATCGACTTACTTCAAGTGGGGATGATGCTGAGGCAGGCAACATGTCGATCTCTGTGCCTGATAGATGAATTTGGTAAAGGTACCCTTACAGAAGATGGCATTGGTCTTCTAGGTGGAACGATCACCCATTTTGCAAGTTCTAATGACTCTCCAAAGGTGCTGGTGTGCACTCATCTAACTGAGCTAATTAATGAGAGTTTTCTGCCAATGTGCGAAAGAATCAAGTTCTACAACATGACTGTGATACGACCCGACAATGATTGCACTGAAAATGAAGATATCGTATTTCTTTACCGTTTGGTCCCAGGACACGCACTTCCCAGCTATGGTCTGCACTGTGCATTGCTTGCTGGCGTTCCTGATGAGGTTATTAAGAGAGCAGCATTTGTTTTGGATGCTATGGAGAATCATAAGCACGTTGAGCGGCTACACAATGAGAATTTATCCGCTCAAGATAAGCTATACCAGGATGCGGTCGATAAGTTGCTAAGACTTGATGTTAACAAGTGTGATCTTGGCCGTTTCTTTCAGGACATATTTCTTTCTTAA
Protein:  
MEEVDETEAVPQIYMACVKHGQKVGVSYYDSSIRQLHVLEVWEDGSIEYPLIDLVKYQAKPLMIYTSTKSEESFLAALQRSDGMSEAPTVKLVKSSIFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSMMDVESEVQVRASGGLLAILESERIVDTLEQKELGTSSITIDSVIEISLNNFLKLDATALEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPLLDLENLNKRLNAISFFISSDELMHSLRETLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSICSLLHVNKIFEVGMSENLKENMKYFNLDIVEKANTCITTELAYVYELVIGVLDVSRSKEKSYETIVKEGFCEELDELREVYEELPEFLEEVSSMELAQFPQLCKYTIAPCIVYIHQIGYLLCIFEEKLDESTLEILQDFEFAFSDVDGDIKRFFYHSPKTRELDNLLGDIYHKILDMERAIIRDLVSHILVFSLHLHKAVDFAAELDCFLSLALIARQNNYVRPDLTADSMLDIKNGRHVLQEMAVDTFIPNDTKIFYDGRVNIITGPNYSGKSIYVKQVALIVFLSHIGSFVPAEAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGMMLRQATCRSLCLIDEFGKGTLTEDGIGLLGGTITHFASSNDSPKVLVCTHLTELINESFLPMCERIKFYNMTVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAAFVLDAMENHKHVERLHNENLSAQDKLYQDAVDKLLRLDVNKCDLGRFFQDIFLS